Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM47Transmembrane protein 47. (181 aa)    
Predicted Functional Partners:
armh1
Armadillo like helical domain containing 1.
      
 0.770
fbxo21
F-box protein 21.
      
 0.696
ENSONIP00000057115
Ubiquitin carboxyl-terminal hydrolase CYLD.
      
 0.676
Nexn
Nexilin (F actin binding protein).
      
 0.662
Kbtbd2
Kelch repeat and BTB (POZ) domain containing 2.
      
 0.660
dmrt2
Doublesex and mab-3 related transcription factor 2a.
      
 0.653
dmrt2b
Doublesex and mab-3 related transcription factor 2b.
      
 0.640
LOC100704490
Importin 13.
      
 0.628
LOC100691569
Cytochrome b5 reductase 4.
      
 0.604
LOC100697085
Abhydrolase domain containing 17A.
      
 0.597
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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