STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfpl1Zinc finger protein-like 1. (327 aa)    
Predicted Functional Partners:
imp4
IMP U3 small nucleolar ribonucleoprotein 4.
      
 0.592
tm9sf3
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.578
Stx5
Syntaxin 5A; Belongs to the syntaxin family.
   
  
 0.481
mgat1
Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a.
      
 0.465
LOC100711079
Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b.
      
 0.465
I3KLQ3_ORENI
Magnesium transporter 1.
      
 0.461
LOC100704623
Tumor suppressor candidate 3.
      
 0.461
rad9a
Cell cycle checkpoint control protein; Belongs to the rad9 family.
      
 0.436
rad9b
RAD9 checkpoint clamp component B.
      
 0.436
tmf1
TATA element modulatory factor 1.
      
 0.426
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.