Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3J012_ORENIHeterogeneous nuclear ribonucleoprotein M. (679 aa)    
Predicted Functional Partners:
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.995
LOC100706673
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.995
rbmx
RNA binding motif protein X-linked.
   
 0.983
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.980
hnrnpa1
Heterogeneous nuclear ribonucleoprotein A1b.
   
 0.980
LOC109194311
RRM domain-containing protein.
   
 0.978
LOC100708824
RRM domain-containing protein.
   
 0.978
hnrnpu
Heterogeneous nuclear ribonucleoprotein Ub.
   
 0.977
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.944
LOC100701209
Zinc finger protein 207.
   
   0.925
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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