I3J059_ORENI protein (Oreochromis niloticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

I3J059_ORENI

Regulator of G protein signaling 12a. (1292 aa)

Predicted Functional Partners:

rap1b

0.657

LOC100690250

0.657

LOC100703259

0.615

LOC100706288

0.611

apc2

0.577

LOC100703527

0.568

I3J8H8_ORENI

0.554

LOC100700658

0.554

LOC100707702

0.554

LOC100693875

0.554

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I3J059_ORENI	I3J8H8_ORENI	ENSONIP00000002249	ENSONIP00000005168	Regulator of G protein signaling 12a.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.	0.554
I3J059_ORENI	LOC100690250	ENSONIP00000002249	ENSONIP00000037462	Regulator of G protein signaling 12a.	Ras-related protein Rap-1A.	0.657
I3J059_ORENI	LOC100693875	ENSONIP00000002249	ENSONIP00000012828	Regulator of G protein signaling 12a.	Uncharacterized protein.	0.554
I3J059_ORENI	LOC100700658	ENSONIP00000002249	ENSONIP00000006648	Regulator of G protein signaling 12a.	Uncharacterized protein.	0.554
I3J059_ORENI	LOC100703259	ENSONIP00000002249	ENSONIP00000003131	Regulator of G protein signaling 12a.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	0.615
I3J059_ORENI	LOC100703527	ENSONIP00000002249	ENSONIP00000003136	Regulator of G protein signaling 12a.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	0.568
I3J059_ORENI	LOC100706288	ENSONIP00000002249	ENSONIP00000005117	Regulator of G protein signaling 12a.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.611
I3J059_ORENI	LOC100707702	ENSONIP00000002249	ENSONIP00000012822	Regulator of G protein signaling 12a.	Uncharacterized protein.	0.554
I3J059_ORENI	apc2	ENSONIP00000002249	ENSONIP00000031923	Regulator of G protein signaling 12a.	APC regulator of WNT signaling pathway 2.	0.577
I3J059_ORENI	rap1b	ENSONIP00000002249	ENSONIP00000022720	Regulator of G protein signaling 12a.	Uncharacterized protein.	0.657
I3J8H8_ORENI	I3J059_ORENI	ENSONIP00000005168	ENSONIP00000002249	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.	Regulator of G protein signaling 12a.	0.554
I3J8H8_ORENI	LOC100693875	ENSONIP00000005168	ENSONIP00000012828	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.	Uncharacterized protein.	0.546
I3J8H8_ORENI	LOC100700658	ENSONIP00000005168	ENSONIP00000006648	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.	Uncharacterized protein.	0.564
I3J8H8_ORENI	LOC100703259	ENSONIP00000005168	ENSONIP00000003131	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	0.762
I3J8H8_ORENI	LOC100703527	ENSONIP00000005168	ENSONIP00000003136	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	0.912
I3J8H8_ORENI	LOC100706288	ENSONIP00000005168	ENSONIP00000005117	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.762
I3J8H8_ORENI	LOC100707702	ENSONIP00000005168	ENSONIP00000012822	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.	Uncharacterized protein.	0.546
LOC100690250	I3J059_ORENI	ENSONIP00000037462	ENSONIP00000002249	Ras-related protein Rap-1A.	Regulator of G protein signaling 12a.	0.657
LOC100693875	I3J059_ORENI	ENSONIP00000012828	ENSONIP00000002249	Uncharacterized protein.	Regulator of G protein signaling 12a.	0.554
LOC100693875	I3J8H8_ORENI	ENSONIP00000012828	ENSONIP00000005168	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.	0.546