STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
n6amt1N-6 adenine-specific DNA methyltransferase 1. (218 aa)    
Predicted Functional Partners:
trmt112
tRNA methyltransferase subunit 11-2.
    
 0.999
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.913
cpox
Coproporphyrinogen oxidase.
   
 
 0.911
LOC100694416
Mitochondrial translational release factor 1.
  
 
 0.901
etf1
Eukaryotic translation termination factor 1b.
    
 0.901
mtrf1l
Mitochondrial translational release factor 1-like.
  
 
 0.881
Lg12h12orf65
Si:ch211-275j6.5.
  
 
 0.870
nampt
Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family.
  
 
 0.870
Mettl4
Methyltransferase-like protein 4.
      
 0.776
I3JFN8_ORENI
Methyltransferase like 4; Belongs to the MT-A70-like family.
      
 0.776
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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