Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
colgalt1Collagen beta(1-O)galactosyltransferase 1. (610 aa)    
Predicted Functional Partners:
LOC100699058
Fe2OG dioxygenase domain-containing protein.
   
 0.906
plod2
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.
   
 0.906
LOC100697420
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3.
   
 0.906
LOC100708699
Cerebral endothelial cell adhesion molecule.
     
  0.897
LOC100697625
Collagen beta(1-O)galactosyltransferase 2.
     
  0.847
LOC100712117
Uncharacterized protein.
     
  0.812
I3JR82_ORENI
Uncharacterized protein.
   
 0.639
LOC100700514
Collagen, type VI, alpha 2.
   
 0.639
I3KM92_ORENI
ZnMc domain-containing protein.
    
 
 0.533
LOC100711125
ZnMc domain-containing protein.
    
 
 0.533
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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