Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100709730Galectin. (135 aa)    
Predicted Functional Partners:
LOC100706816
Galectin-3 isoform X2.
   
0.881
LOC100697584
Galectin.
   
0.878
LOC100700684
Galectin.
   
0.877
I3JAJ1_ORENI
Uncharacterized protein.
    
 
 0.750
I3KUM9_ORENI
Protein S100; Belongs to the S-100 family.
   
 0.732
ptprc
Protein tyrosine phosphatase receptor type C.
    
 
 0.695
ENSONIP00000040698
LYR motif containing 9.
      
 0.610
LOC100696710
Epithelial membrane protein 3b.
   
  
 0.604
plac8
Placenta associated 8, tandem duplicate 1.
   
  
 0.580
wsb1
WD repeat and SOCS box containing 1.
      
 0.576
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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