STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSONIP00000002644Si:ch211-263k4.2. (779 aa)    
Predicted Functional Partners:
Prdm16
LOW QUALITY PROTEIN: PR domain zinc finger protein 16.
 
      0.872
ppargc1a
PPARG coactivator 1 alpha.
      
 0.568
ZNF516
Zinc finger protein 516.
    
 
0.509
ENSONIP00000039307
annotation not available
    
 
 0.509
I3JL78_ORENI
Uncharacterized protein.
   
 0.506
LOC100534553
Uncoupling protein 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.485
sox5
SRY-box transcription factor 5.
    
 
 0.476
setbp1
SET-binding protein.
   
 0.469
LOC100699225
Cell death inducing DFFA like effector a.
     
 0.449
fosb
FBJ murine osteosarcoma viral oncogene homolog B.
    
 0.448
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.