Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zmynd12Zinc finger, MYND-type containing 12. (366 aa)    
Predicted Functional Partners:
ribc1
RIB43A domain with coiled-coils 1.
  
 
 0.896
I3JR68_ORENI
NME/NM23 family member 8; Belongs to the NDK family.
    
 
 0.895
lg20h1orf194
Uncharacterized protein.
   
 
 0.885
cfap44
Uncharacterized protein.
   
 
 0.883
tex47
BLUF domain-containing protein.
    
 
 0.874
dpt
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
    
 
 0.869
pacrg
PARK2 co-regulated.
    
 
 0.866
dnali1
Dynein, axonemal, light intermediate chain 1.
   
 
 0.864
efhb
Uncharacterized protein.
   
   0.860
ccdc113
DUF4201 domain-containing protein.
    
   0.844
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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