STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sac3d1Si:zfos-452g4.1. (339 aa)    
Predicted Functional Partners:
pcid2
PCI domain containing 2.
   
 
 0.925
Sem1
26S proteasome complex subunit SEM1.
    
 
 0.920
nxf1
Zgc:153681.
    
 
 0.910
eny2
Enhancer of yellow 2 transcription factor.
    
 
 0.860
LOC100694417
Transcription and mRNA export factor ENY2-2.
    
 
 0.860
LOC100695822
Centrin 4.
    
 
 0.704
crppa
CDP-L-ribitol pyrophosphorylase A.
    
 
 0.704
cetn3
Centrin 3.
    
 
 0.704
LOC100689752
Centrin, EF-hand protein, 2.
    
 
 0.704
nup153
Nucleoporin 153.
    
 
 0.695
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.