Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSONIP00000002750Trichohyalin isoform X2. (1240 aa)    
Predicted Functional Partners:
LOC100711605
Malate synthase-like.
   
 
 0.732
I3J608_ORENI
NBR1 autophagy cargo receptor b.
   
 0.523
nbr1
NBR1 autophagy cargo receptor a.
   
 0.523
I3JR68_ORENI
NME/NM23 family member 8; Belongs to the NDK family.
   
  0.486
wdr90
WD repeat domain 90.
   
 0.455
setbp1
SET-binding protein.
  
  
  0.431
ENSONIP00000081135
Si:dkey-96l17.6.
  
 
 0.413
ckap5
Cytoskeleton associated protein 5.
    
 0.409
LOC102077151
Uncharacterized protein LOC102077151.
  
 
  0.406
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.400
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.