STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gga3Golgi associated, gamma adaptin ear containing, ARF binding protein 3b. (727 aa)    
Predicted Functional Partners:
ENSONIP00000026111
ADP-ribosylation factor 6b.
    
 0.981
LOC100697104
Uncharacterized protein.
   
  0.939
I3KFD8_ORENI
Insulin-like growth factor 2 receptor.
    
 
 0.936
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.932
I3JNW5_ORENI
Uncharacterized protein.
   
  0.914
LOC100692916
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
   
  0.902
M6pr
Uncharacterized protein.
    
 
 0.893
EARS2
Glutamyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
  0.780
ENSONIP00000047919
Ubiquitin B.
   
   0.766
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.759
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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