Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100692640Parvalbumin 4; Belongs to the parvalbumin family. (121 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
   
 0.559
I3JR68_ORENI
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.542
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.536
LOC100693503
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.536
ENSONIP00000016918
Adenylate kinase 9.
    
 0.514
LOC100704512
Troponin I4b, tandem duplicate 1.
   
 0.498
I3KCT8_ORENI
Troponin I, skeletal, slow c.
   
 0.498
ENSONIP00000041633
Troponin I, slow skeletal muscle.
   
 0.498
I3KBM6_ORENI
Troponin I type 1b (skeletal, slow).
   
 0.498
LOC100694855
Uncharacterized protein.
   
 0.498
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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