Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100706302RAB11a, member RAS oncogene family, like. (216 aa)    
Predicted Functional Partners:
LOC100702832
Uncharacterized protein.
    
 0.983
ENSONIP00000081478
LOW QUALITY PROTEIN: rab11 family-interacting protein 1.
    
 0.980
LOC100690222
Uncharacterized protein.
    
 0.972
rab11fip2
RAB11 family interacting protein 2 (class I).
    
 0.964
sfxn5
RAB11 family interacting protein 5a (class I).
    
 0.964
RAB11A
RAB11A, member RAS oncogene family.
     
  0.914
I3JGS7_ORENI
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.853
LOC100697758
Uncharacterized protein.
     
  0.836
LOC100697224
RAB11B, member RAS oncogene family, a.
     
  0.836
I3JG33_ORENI
RAB11 family interacting protein 4 (class II) a.
    
 0.819
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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