Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC100698375UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (238 aa)    
Predicted Functional Partners:
ube2r2
Ubiquitin-conjugating enzyme E2R 2; Belongs to the ubiquitin-conjugating enzyme family.
     
  0.916
LOC100711003
Cell division cycle 34 homolog (S. cerevisiae) a; Belongs to the ubiquitin-conjugating enzyme family.
     
  0.916
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
   
 0.894
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.893
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.892
ENSONIP00000047919
Ubiquitin B.
    
 0.886
rps27a
Ribosomal protein S27a.
    
 0.862
UBA6
Ubiquitin like modifier activating enzyme 6.
   
 0.853
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.828
LOC100702014
Ubiquitin-like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family.
   
 0.816
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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