STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3J1Z3_ORENIHDGF like 2. (313 aa)    
Predicted Functional Partners:
Hdgfl2
Hepatoma-derived growth factor-related protein 2.
 
      0.900
HDGFL3
Hepatoma-derived growth factor-related protein 3.
 
  
   0.586
cdk12
Cyclin-dependent kinase 12.
    
 
 0.551
LOC100710822
Cyclin-dependent kinase 13.
    
 
 0.551
ccnk
Cyclin K; Belongs to the cyclin family.
   
 
 0.414
LOC100709139
Cyclin T2b; Belongs to the cyclin family.
   
 
 0.414
ccnq
Cyclin Q; Belongs to the cyclin family.
   
 
 0.414
LOC100698210
Cyclin T2; Belongs to the cyclin family.
   
 
 0.414
LOC100690070
Cyclin T1; Belongs to the cyclin family.
   
 
 0.414
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.