STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3J1Z6_ORENIDynein regulatory complex subunit 3. (552 aa)    
Predicted Functional Partners:
LOC100707731
Radial spoke head component 4A.
   
  
 0.807
LOC100690350
Coiled-coil domain containing 114.
   
 
 0.762
ccdc40
Coiled-coil domain containing 40.
   
 
 0.716
ak7
Uncharacterized protein.
   
 
 0.649
LOC100705759
Adenylate kinase 7a.
   
 
 0.649
I3JWW0_ORENI
F-box protein 36b.
   
 
  0.633
drc1
Uncharacterized protein.
   
  
 0.601
iqcg
Uncharacterized protein.
   
  
 0.589
I3JR68_ORENI
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.588
GAS8
Growth arrest specific 8.
      
 0.585
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.