Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3J1Z6_ORENIDynein regulatory complex subunit 3. (552 aa)    
Predicted Functional Partners:
GAS8
Growth arrest specific 8.
   
 
 0.947
drc1
Uncharacterized protein.
   
 
 0.920
I3KBQ4_ORENI
Uncharacterized protein.
   
 
 0.906
iqcg
Uncharacterized protein.
   
 
 0.896
Tcte1
T-complex-associated-testis-expressed 1.
    
 
 0.885
cfap45
Cilia and flagella associated protein 45.
   
 
 0.840
cfap58
Cilia and flagella associated protein 58.
   
 0.830
LOC100707731
Radial spoke head component 4A.
   
 
 0.824
cfap44
Uncharacterized protein.
   
 
 0.811
I3IV59_ORENI
Cilia and flagella associated protein 43.
   
 
 0.774
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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