STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
noc2lNOC2-like nucleolar associated transcriptional repressor. (750 aa)    
Predicted Functional Partners:
noc3l
Nucleolar complex protein 3 homolog.
   
 
 0.999
LOC100711132
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.998
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.998
gtpbp4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.997
Cebpz
CCAAT enhancer binding protein zeta.
   
 
 0.997
ddx18
RNA helicase.
   
 
 0.995
pdcd11
Programmed cell death 11.
   
 
 0.995
rpf2
Ribosome production factor 2 homolog.
   
 
 0.995
Brix1
Brix domain containing 2.
   
 
 0.994
ebna1bp2
EBNA1 binding protein 2.
   
 
 0.994
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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