STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEND4BEN domain containing 4. (423 aa)    
Predicted Functional Partners:
tmem33
Transmembrane protein 33.
      
 0.582
slc30a9
Solute carrier family 30 member 9.
      
 0.497
rsu1
Ras suppressor protein 1.
      
 0.480
shisa3
Shisa family member 3.
      
 0.436
LOC100701631
Potassium voltage-gated channel, subfamily G, member 2; Belongs to the potassium channel family.
      
 0.429
akap1
A kinase (PRKA) anchor protein 1b.
      
 0.428
LOC100696985
HIV-1 Tat specific factor 1.
      
 0.420
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.