Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100693207Uncharacterized protein. (238 aa)    
Predicted Functional Partners:
wdr43
WD repeat domain 43.
      
 0.629
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.568
I3KTJ2_ORENI
Rabaptin, RAB GTPase binding effector protein 2.
    
 0.568
LOC100690310
Protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative).
      
 0.539
hsd17b8
Hydroxysteroid (17-beta) dehydrogenase 8.
      
 0.533
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.511
LOC100689725
C2 calcium dependent domain containing 4A.
      
 0.503
btbd9
BTB (POZ) domain containing 9.
      
 0.498
LOC100696852
Uncharacterized protein.
      
 0.492
bhlha15
Basic helix-loop-helix family, member a15.
      
 0.456
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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