Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Fam92aFamily with sequence similarity 92 member A1. (263 aa)    
Predicted Functional Partners:
LOC100692890
RAN binding protein 2.
   
 0.700
LOC100699994
DAZ interacting zinc finger protein 1.
   
 0.536
I3KL23_ORENI
Thioredoxin domain containing 15.
      
 0.521
LOC109194257
Thioredoxin domain-containing protein 15-like.
      
 0.521
cby1
Chibby homolog 1 (Drosophila).
    
 
 0.506
LOC100700062
Ran GTPase activating protein 1b.
   
 0.481
rangap1
RAN GTPase activating protein 1a.
   
 0.481
LOC100695509
RAB guanine nucleotide exchange factor (GEF) 1, like.
    
 0.477
LOC100697359
Uncharacterized protein.
    
 0.477
Rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
    
 0.477
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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