STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100693853Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family. (328 aa)    
Predicted Functional Partners:
tyms
Thymidylate synthetase.
  
 0.876
cenpn
Centromere protein N.
   
 0.814
cenpk
Centromere protein K.
   
 0.811
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
  
 0.789
rfc3
Replication factor C (activator 1) 3.
   
  
 0.778
cenpm
Proliferation associated nuclear element.
   
 0.776
LOC100704432
Centromere protein S.
   
 0.763
wscd2
WSC domain containing 2.
   
 0.763
LOC100709793
WSC domain containing 1b.
   
 0.763
LOC100698045
Somatostatin-1B.
   
 0.763
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.