STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem161aTransmembrane protein 161A. (499 aa)    
Predicted Functional Partners:
klhl31
Kelch-like family member 31.
      
 0.681
tmem38a
Transmembrane protein 38A.
      
 0.601
Tmem94
Transmembrane protein 94.
      
 0.582
Nfatc4
Nuclear factor of activated T-cells, cytoplasmic 4 isoform X1.
      
 0.510
Pold1
DNA polymerase.
      
 0.493
tmem214
Transmembrane protein 214.
      
 0.489
CDC25B
Cell division cycle 25B.
      
 0.467
popdc3
Popeye domain containing 3.
      
 0.463
popdc2
Popeye domain containing 2.
      
 0.463
tmem117
Transmembrane protein 117.
      
 0.429
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.