Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem161aTransmembrane protein 161A. (499 aa)    
Predicted Functional Partners:
ogfod3
Urotensin-2 receptor 2.
   
  
 0.926
zdhhc6
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.923
pigb
Mannosyltransferase.
      
 0.923
tmem209
Transmembrane protein 209.
      
 0.784
GPR180
G protein-coupled receptor 180.
      
 0.767
tmem53
Transmembrane protein 53.
      
 0.758
klhl31
Kelch-like family member 31.
      
 0.756
ndc1
NDC1 transmembrane nucleoporin.
      
 0.700
Tmem94
Transmembrane protein 94.
      
 0.674
ckap4
Uncharacterized protein.
      
 0.655
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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