LOC100703527 protein (Oreochromis niloticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC100703527

Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3. (363 aa)

Predicted Functional Partners:

drd2

0.950

drd3

0.950

LOC100711263

0.947

LOC100702089

0.947

LOC100712161

0.947

lpar1

0.947

PLCB4

0.946

LOC100692921

0.944

LOC102079696

0.941

LOC100704531

0.941

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100692921	LOC100703527	ENSONIP00000035064	ENSONIP00000003136	Purinergic receptor P2Y12.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	0.944
LOC100702089	LOC100703527	ENSONIP00000025938	ENSONIP00000003136	Apelin receptor b; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	0.947
LOC100703527	LOC100692921	ENSONIP00000003136	ENSONIP00000035064	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	Purinergic receptor P2Y12.	0.944
LOC100703527	LOC100702089	ENSONIP00000003136	ENSONIP00000025938	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	Apelin receptor b; Belongs to the G-protein coupled receptor 1 family.	0.947
LOC100703527	LOC100704531	ENSONIP00000003136	ENSONIP00000009576	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.941
LOC100703527	LOC100711263	ENSONIP00000003136	ENSONIP00000007720	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.947
LOC100703527	LOC100712161	ENSONIP00000003136	ENSONIP00000049086	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	Opioid receptor, kappa 1; Belongs to the G-protein coupled receptor 1 family.	0.947
LOC100703527	LOC102079696	ENSONIP00000003136	ENSONIP00000004958	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	Dopamine receptor D4a; Belongs to the G-protein coupled receptor 1 family.	0.941
LOC100703527	PLCB4	ENSONIP00000003136	ENSONIP00000044450	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.946
LOC100703527	drd2	ENSONIP00000003136	ENSONIP00000007762	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	Dopamine receptor D2a; Belongs to the G-protein coupled receptor 1 family.	0.950
LOC100703527	drd3	ENSONIP00000003136	ENSONIP00000017685	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	Dopamine receptor D3; Belongs to the G-protein coupled receptor 1 family.	0.950
LOC100703527	lpar1	ENSONIP00000003136	ENSONIP00000057525	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	Lysophosphatidic acid receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.947
LOC100704531	LOC100703527	ENSONIP00000009576	ENSONIP00000003136	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	0.941
LOC100704531	LOC102079696	ENSONIP00000009576	ENSONIP00000004958	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Dopamine receptor D4a; Belongs to the G-protein coupled receptor 1 family.	0.613
LOC100704531	drd2	ENSONIP00000009576	ENSONIP00000007762	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Dopamine receptor D2a; Belongs to the G-protein coupled receptor 1 family.	0.896
LOC100704531	drd3	ENSONIP00000009576	ENSONIP00000017685	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Dopamine receptor D3; Belongs to the G-protein coupled receptor 1 family.	0.635
LOC100711263	LOC100703527	ENSONIP00000007720	ENSONIP00000003136	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	0.947
LOC100711263	LOC100712161	ENSONIP00000007720	ENSONIP00000049086	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Opioid receptor, kappa 1; Belongs to the G-protein coupled receptor 1 family.	0.916
LOC100712161	LOC100703527	ENSONIP00000049086	ENSONIP00000003136	Opioid receptor, kappa 1; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	0.947
LOC100712161	LOC100711263	ENSONIP00000049086	ENSONIP00000007720	Opioid receptor, kappa 1; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.916