STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100697755Si:ch211-129c21.1; Belongs to the semaphorin family. (782 aa)    
Predicted Functional Partners:
ptprc
Protein tyrosine phosphatase receptor type C.
    
 0.681
LOC100701740
Macrophage stimulating 1 receptor a.
    
 0.644
mst1r
Macrophage stimulating 1 receptor b.
    
 0.644
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.644
LOC100703115
Plexin B3.
    
 0.623
LOC100711384
Plexin b1b.
    
 0.623
I3JQC3_ORENI
Sema domain-containing protein.
    
 0.623
I3JQ94_ORENI
Plexin b2b.
    
 0.623
I3KNB3_ORENI
Sema domain-containing protein.
    
 0.623
LOC100693707
Plexin b1a.
    
0.623
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.