Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mcts1Malignant T-cell-amplified sequence. (181 aa)    
Predicted Functional Partners:
denr
Density-regulated protein; Belongs to the DENR family.
   
 
 0.994
sbds
SBDS ribosome maturation factor.
   
 
 0.784
LOC100702522
Eukaryotic translation initiation factor 1B.
   
 
 0.773
I3KL14_ORENI
Eukaryotic translation initiation factor 2D.
    
 
 0.744
rps20
Ribosomal protein S20.
   
   0.693
gtf2e1
General transcription factor IIE, polypeptide 1, alpha.
    
   0.668
otud6b
OTU domain containing 6B.
    
 
 0.630
hm13
Histocompatibility (minor) 13.
      
 0.607
Pop4
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
  
 0.596
lg12h9orf64
Queuosine salvage protein; Involved in salvaging queuosine.
 
      0.591
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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