Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Necab1N-terminal EF-hand calcium binding protein 1. (346 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
   
 0.728
LOC100698673
Zgc:172182.
      
 0.633
KCNIP4
Potassium voltage-gated channel interacting protein 4.
   
 
 0.573
efhc2
EF-hand domain (C-terminal) containing 2.
    
 
 0.544
wdr24
WD repeat domain 24.
     
 0.535
LOC100704658
Synaptotagmin Vb.
   
  
 0.533
snrpb
Small nuclear ribonucleoprotein-associated protein.
      
 0.520
LOC100706664
Amyloid beta precursor protein binding family A member 3.
   
 
 0.504
I3J1N4_ORENI
EF-hand calcium binding domain 1.
    
 
 0.495
CTXN1
Cortexin 1.
      
 0.493
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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