Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hes1Hairy-related 6. (289 aa)    
Predicted Functional Partners:
fancf
FA complementation group F.
    
  0.979
fanca
Fanconi_A_N domain-containing protein.
    
  0.979
fancg
FA complementation group G.
    
  0.979
fancc
FA complementation group C.
    
  0.979
fancl
FA complementation group L.
    
  0.979
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.968
fance
FA complementation group E.
    
  0.963
LOC100707106
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.962
LOC106098755
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.961
rpl10a
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.938
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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