STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpd52Tumor protein D52. (249 aa)    
Predicted Functional Partners:
mal2
Mal, T cell differentiation protein 2 (gene/pseudogene).
   
 
 0.654
I3KC69_ORENI
Tpd52 like 2b.
  
 
  
0.621
ap4e1
Adaptor related protein complex 4 subunit epsilon 1.
     
 0.613
yipf6
Protein YIPF.
     
 0.605
Tgoln2
Trans-Golgi network integral membrane protein 2.
    
  0.599
LOC100691194
Vesicle-associated membrane protein 8.
     
 0.548
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
     
 0.547
LOC100691058
Tpd52 like 2a.
    
  
0.524
snx8
Sorting nexin 8a.
     
 0.516
LOC100692540
Sorting nexin 1a.
     
 0.513
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.