STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xxylt1Xyloside xylosyltransferase 1. (404 aa)    
Predicted Functional Partners:
pofut1
Protein O-fucosyltransferase 1.
      
 0.563
svbp
Small vasohibin binding protein.
    
 0.561
eogt
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase.
      
 0.512
POGLUT1
Protein O-glucosyltransferase 1.
      
 0.497
ENSONIP00000015004
LOW QUALITY PROTEIN: protein O-glucosyltransferase 1-like.
      
 0.497
LOC100690985
Family with sequence similarity 174 member B.
      
 0.477
reep3
Receptor expression-enhancing protein.
   
  
 0.470
GAN
Gigaxonin.
      
 0.437
GXYLT1
Glucoside xylosyltransferase 1.
      
 0.426
LOC100708367
Glucoside xylosyltransferase 1b.
      
 0.426
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.