Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC100704305Myosin VAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1880 aa)    
Predicted Functional Partners:
rab27a
RAB27A, member RAS oncogene family.
    
 0.784
calm1
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.773
exoc4
Exocyst complex component 4.
   
 0.750
LOC100706302
RAB11a, member RAS oncogene family, like.
   
 0.724
LOC100697758
Uncharacterized protein.
   
 0.724
LOC100697224
RAB11B, member RAS oncogene family, a.
   
 0.724
RAB11A
RAB11A, member RAS oncogene family.
   
 0.724
RAB11B
Ras-related protein Rab-11B.
   
 0.724
rab11fip2
RAB11 family interacting protein 2 (class I).
   
 0.704
LOC100690222
Uncharacterized protein.
   
 0.704
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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