Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mylipMyosin regulatory light chain interacting protein a. (481 aa)    
Predicted Functional Partners:
cnpy2
Canopy FGF signaling regulator 2.
    
 
 0.879
ldlr
Low density lipoprotein receptor a.
    
 0.874
I3JQH3_ORENI
Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor.
    
 0.874
LOC100711575
Low-density lipoprotein receptor isoform X2.
    
 0.874
LOC100712136
Uncharacterized protein.
    
 0.874
vldlr
Very low density lipoprotein receptor.
    
 0.874
LOC100692470
Cyclin B2; Belongs to the cyclin family.
   
 0.831
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
   0.759
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
   0.758
rps27a
Ribosomal protein S27a.
    
  0.733
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.