STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chrna5Cholinergic receptor, nicotinic, alpha 5. (463 aa)    
Predicted Functional Partners:
LOC100691234
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.635
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.634
LOC100703627
Cholinergic receptor, nicotinic, alpha 4b.
  
0.611
LOC100690921
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.609
LOC100691407
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
0.609
LOC100696671
Cholinergic receptor, nicotinic, beta 4 (neuronal).
  
0.595
LOC100706970
Cholinergic receptor, nicotinic, alpha 3.
  
0.594
LOC100700288
Cholinergic receptor, nicotinic, beta 5a.
  
0.529
chrnb2
Cholinergic receptor, nicotinic, beta 2.
  
0.522
I3JCA1_ORENI
Cholinergic receptor, nicotinic, beta 5b.
  
0.519
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.