Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lin37Lin-37 DREAM MuvB core complex component. (242 aa)    
Predicted Functional Partners:
lin52
Protein lin-52 homolog.
    
 0.999
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.999
mybl2
V-myb avian myeloblastosis viral oncogene homolog-like 2b.
    
 0.995
MYBL2
Uncharacterized protein LOC100690281 isoform X1.
    
 0.995
mybl1
V-myb avian myeloblastosis viral oncogene homolog-like 1.
    
 0.991
lin54
Lin-54 DREAM MuvB core complex component.
    
 0.987
LOC100710529
Protein lin-54 homolog isoform X1.
    
 0.987
LOC100706337
WD_REPEATS_REGION domain-containing protein.
    
 0.973
LOC100711479
Retinoblastoma binding protein 4.
    
 0.973
LOC100695351
Retinoblastoma binding protein 4, like.
    
 0.973
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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