eef1aknmt protein (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

eef1aknmt

Methyltransferase like 13. (702 aa)

Predicted Functional Partners:

tm9sf4

0.899

LOC100705997

0.844

LOC100693961

0.780

smarcc2

0.780

smarcc1

0.780

EEF1AKMT2

0.740

hck

0.701

LOC100710258

0.663

I3JR57_ORENI

0.652

Vcpkmt

0.648

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EEF1AKMT2	I3JR57_ORENI	ENSONIP00000000667	ENSONIP00000011351	EEF1A lysine methyltransferase 2; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-318'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	FATP synthase c subunit lysine N-methyltransferase.	0.679
EEF1AKMT2	Vcpkmt	ENSONIP00000000667	ENSONIP00000025390	EEF1A lysine methyltransferase 2; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-318'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	Valosin containing protein lysine (K) methyltransferase.	0.713
EEF1AKMT2	eef1aknmt	ENSONIP00000000667	ENSONIP00000003472	EEF1A lysine methyltransferase 2; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-318'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	Methyltransferase like 13.	0.740
I3JR57_ORENI	EEF1AKMT2	ENSONIP00000011351	ENSONIP00000000667	FATP synthase c subunit lysine N-methyltransferase.	EEF1A lysine methyltransferase 2; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-318'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	0.679
I3JR57_ORENI	Vcpkmt	ENSONIP00000011351	ENSONIP00000025390	FATP synthase c subunit lysine N-methyltransferase.	Valosin containing protein lysine (K) methyltransferase.	0.698
I3JR57_ORENI	eef1aknmt	ENSONIP00000011351	ENSONIP00000003472	FATP synthase c subunit lysine N-methyltransferase.	Methyltransferase like 13.	0.652
LOC100693961	eef1aknmt	ENSONIP00000002548	ENSONIP00000003472	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.	Methyltransferase like 13.	0.780
LOC100693961	smarcc2	ENSONIP00000002548	ENSONIP00000030954	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.	0.912
LOC100705997	eef1aknmt	ENSONIP00000030070	ENSONIP00000003472	Transmembrane p24 trafficking protein 5.	Methyltransferase like 13.	0.844
LOC100705997	hck	ENSONIP00000030070	ENSONIP00000064640	Transmembrane p24 trafficking protein 5.	Tyrosine-protein kinase.	0.709
LOC100705997	tm9sf4	ENSONIP00000030070	ENSONIP00000079658	Transmembrane p24 trafficking protein 5.	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	0.845
LOC100710258	eef1aknmt	ENSONIP00000021239	ENSONIP00000003472	Leucine rich repeat containing 17.	Methyltransferase like 13.	0.663
Vcpkmt	EEF1AKMT2	ENSONIP00000025390	ENSONIP00000000667	Valosin containing protein lysine (K) methyltransferase.	EEF1A lysine methyltransferase 2; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-318'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	0.713
Vcpkmt	I3JR57_ORENI	ENSONIP00000025390	ENSONIP00000011351	Valosin containing protein lysine (K) methyltransferase.	FATP synthase c subunit lysine N-methyltransferase.	0.698
Vcpkmt	eef1aknmt	ENSONIP00000025390	ENSONIP00000003472	Valosin containing protein lysine (K) methyltransferase.	Methyltransferase like 13.	0.648
eef1aknmt	EEF1AKMT2	ENSONIP00000003472	ENSONIP00000000667	Methyltransferase like 13.	EEF1A lysine methyltransferase 2; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-318'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	0.740
eef1aknmt	I3JR57_ORENI	ENSONIP00000003472	ENSONIP00000011351	Methyltransferase like 13.	FATP synthase c subunit lysine N-methyltransferase.	0.652
eef1aknmt	LOC100693961	ENSONIP00000003472	ENSONIP00000002548	Methyltransferase like 13.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.	0.780
eef1aknmt	LOC100705997	ENSONIP00000003472	ENSONIP00000030070	Methyltransferase like 13.	Transmembrane p24 trafficking protein 5.	0.844
eef1aknmt	LOC100710258	ENSONIP00000003472	ENSONIP00000021239	Methyltransferase like 13.	Leucine rich repeat containing 17.	0.663