STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
surf2Surfeit 2. (248 aa)    
Predicted Functional Partners:
LOC100693800
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
      
 0.652
surf6
Surfeit 6.
      
 0.587
med22
AP2 associated kinase 1a.
   
  
 0.584
prepl
Prolyl endopeptidase like.
      
 0.581
surf4
Surfeit 4.
      
 0.547
LOC100699423
Uncharacterized protein.
      
 0.547
Itga10
Integrin, alpha 10; Belongs to the integrin alpha chain family.
      
 0.487
Clcc1
Uncharacterized protein.
      
 0.465
Nexn
Nexilin (F actin binding protein).
      
 0.463
ENSONIP00000030668
ALG12 alpha-1,6-mannosyltransferase.
      
 0.443
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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