Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
surf2Surfeit 2. (248 aa)    
Predicted Functional Partners:
LOC100693800
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
      
 0.893
surf6
Surfeit 6.
      
 0.767
RPL5
Ribosomal protein L5.
    
   0.761
RPL5-2
Large subunit ribosomal protein L5e.
    
   0.761
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
   0.761
med22
AP2 associated kinase 1a.
   
  
 0.717
RPL7A
Ribosomal protein L7a.
   
  
 0.707
prepl
Prolyl endopeptidase like.
      
 0.700
surf4
Surfeit 4.
      
 0.690
LOC100699423
Uncharacterized protein.
      
 0.690
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.