STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100691352Zgc:63863. (465 aa)    
Predicted Functional Partners:
LOC100696366
Uncharacterized protein.
    
 0.802
LOC100695098
ZRAB1B, member RAS oncogene family a.
    
 0.802
ENSONIP00000073858
Ras-related protein ORAB-1.
    
 0.802
LOC100707666
Uncharacterized protein.
    
 0.802
LOC100689790
RAB33B, member RAS oncogene family a.
    
 0.637
LOC100702116
RAB33A, member RAS oncogene family.
    
 0.637
LOC106096430
RAB19, member RAS oncogene family.
    
 0.609
I3KJD9_ORENI
Uncharacterized protein.
    
 0.609
LOC100691191
Uncharacterized protein.
    
 0.587
cgnl1
Cingulin-like 1.
    
 0.587
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.