Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
tent4bTerminal nucleotidyltransferase 4B. (672 aa)    
Predicted Functional Partners:
I3JJE8_ORENI
Terminal nucleotidyltransferase 4A.
  
  
 
0.961
tent4a
Terminal nucleotidyltransferase 4A.
  
  
 
0.960
zcchc7
Zinc finger, CCHC domain containing 7.
   
 0.934
LOC102079931
Zinc finger CCHC domain-containing protein 7.
   
 0.878
mtrex
Mtr4 exosome RNA helicase.
   
 0.833
exosc10
Exosome component 10.
   
 0.830
Zcchc14
Zinc finger, CCHC domain containing 14.
   
 0.801
LOC100704180
Poly(A) polymerase gamma.
    
 
 0.745
Tut1
Terminal uridylyl transferase 1, U6 snRNA-specific.
   
  
 0.699
znfx1
Zinc finger, NFX1-type containing 1.
    
 
 0.693
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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