Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100709778Far upstream element (FUSE) binding protein 3. (565 aa)    
Predicted Functional Partners:
I3JBV9_ORENI
QKI, KH domain containing, RNA binding a.
   
 
 0.792
qki
QKI, KH domain containing, RNA binding 2.
   
 
 0.792
I3JJF1_ORENI
QKI, KH domain containing, RNA binding b.
   
 
 0.792
puf60
Poly-U binding splicing factor b.
   
 
 0.772
sumf2
Inactive C-alpha-formylglycine-generating enzyme 2 isoform X1.
    
   0.759
I3J012_ORENI
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.691
KHSRP
KH-type splicing regulatory protein.
   
   0.680
fubp1
Far upstream element (FUSE) binding protein 1.
   
   0.680
LOC100698089
Uncharacterized protein.
   
   0.680
celf1
Cugbp, Elav-like family member 1.
   
 
 0.678
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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