STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
heatr3HEAT repeat containing 3. (679 aa)    
Predicted Functional Partners:
ca7
Carbonic anhydrase VII; Belongs to the alpha-carbonic anhydrase family.
 
    
 0.765
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.671
rpf2
Ribosome production factor 2 homolog.
   
 
 0.621
RPL5
Ribosomal protein L5.
    
 
 0.610
RPL5-2
Large subunit ribosomal protein L5e.
    
 
 0.610
lg18h14orf119
Si:ch211-14a17.11.
   
  
 0.587
grwd1
Glutamate-rich WD repeat containing 1.
   
  
 0.581
gtdc1
Glycosyltransferase-like domain containing 1.
      
 0.573
znf592
Uncharacterized protein.
      
 0.535
I3KUR8_ORENI
Proteasome 26S subunit, non-ATPase 4a.
      
 0.478
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.