Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100704190Uncharacterized protein. (1693 aa)    
Predicted Functional Partners:
cfi
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.822
cfp
Uncharacterized protein.
   
 0.790
LOC100710343
Complement decay-accelerating factor transmembrane isoform.
    
 0.734
c6
Complement component 6.
   
 0.715
LOC100692629
C1q domain-containing protein.
   
 0.708
LOC100707990
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.674
LOC100697699
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.674
c5
Uncharacterized protein.
   
  0.645
c9
Complement component 9.
   
 0.629
PTX3
Pentraxin-related protein PTX3.
    
 
 0.587
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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