STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3J3Z9_ORENILaminin, alpha 3. (1093 aa)    
Predicted Functional Partners:
itgav
Integrin, alpha V; Belongs to the integrin alpha chain family.
    
 0.923
Itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.918
LOC100706244
Laminin, beta 2 (laminin S).
   
 0.830
LOC100706507
Laminin, beta 2-like.
   
 0.830
I3JAF0_ORENI
Uncharacterized protein.
 
 
 0.830
LOC100690471
Laminin, beta 1b.
   
 0.830
LOC100707779
Laminin, beta 1a.
   
 0.830
LAMA2
Laminin subunit alpha 2.
   
0.806
lama4
Laminin, alpha 4.
   
0.806
LAMA3
Laminin subunit alpha 3.
   
0.806
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.