STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cnep1r1CTD nuclear envelope phosphatase 1 regulatory subunit 1. (148 aa)    
Predicted Functional Partners:
Ctdnep1
CTD nuclear envelope phosphatase 1b.
   
 0.976
ublcp1
Ubiquitin-like domain containing CTD phosphatase 1.
   
 0.615
casc4
CTD small phosphatase like 2.
    
 0.608
LOC100695025
CTD small phosphatase like 2.
    
 0.608
CTDSP1
CTD small phosphatase 1.
    
 0.608
LOC100693172
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 3.
    
 0.608
LOC100691308
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b.
    
 0.608
ctdspl
Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase.
    
 0.608
ENSONIP00000039288
Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase.
    
 0.608
ctdsp2
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2.
    
 0.608
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.