Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3J438_ORENIUncharacterized protein. (264 aa)    
Predicted Functional Partners:
LOC100711605
Malate synthase-like.
   
 
 0.732
LOC102079697
AIG1-type G domain-containing protein.
  
  0.540
I3J608_ORENI
NBR1 autophagy cargo receptor b.
   
 0.523
nbr1
NBR1 autophagy cargo receptor a.
   
 0.523
I3JR68_ORENI
NME/NM23 family member 8; Belongs to the NDK family.
   
  0.486
LOC102076869
AIG1-type G domain-containing protein.
  
  0.477
wdr90
WD repeat domain 90.
   
 0.455
ENSONIP00000038367
annotation not available
  
     0.454
ckap5
Cytoskeleton associated protein 5.
    
 0.409
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.400
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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