Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
relV-rel avian reticuloendotheliosis viral oncogene homolog. (609 aa)    
Predicted Functional Partners:
LOC100691708
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.
   
 0.942
nfkbia
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
   
 0.942
Nfkb2
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100).
   
 0.929
I3J9E1_ORENI
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
   
 0.929
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.918
LOC100534578
Tumor necrosis factor b (TNF superfamily, member 2).
   
 0.901
nfkbie
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon.
   
 0.894
LOC100707066
Interleukin-1.
   
 0.889
tbk1
TANK-binding kinase 1.
   
 0.885
sirt1
Deacetylase sirtuin-type domain-containing protein.
    
 0.875
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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