Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC100695600RNA binding motif protein 24b. (235 aa)    
Predicted Functional Partners:
LOC100692969
RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.
  
 
 0.630
Elavl3
ELAV-like protein; Belongs to the RRM elav family.
  
   
 0.575
ELAVL2
ELAV-like protein; Belongs to the RRM elav family.
  
   
 0.573
LOC100706107
ELAV-like protein; Belongs to the RRM elav family.
  
   
 0.572
LOC100695900
ELAV-like protein; Belongs to the RRM elav family.
  
   
 0.568
LOC100710029
ELAV-like protein; Belongs to the RRM elav family.
  
   
 0.565
ENSONIP00000044135
annotation not available
   
 
 0.556
LOC100696733
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
  
 
0.549
zcrb1
Zinc finger CCHC-type and RNA binding motif 1.
  
   
 0.500
tra2a
Transformer 2 alpha homolog.
  
   
 0.498
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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