Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gsx2GS homeobox 2. (238 aa)    
Predicted Functional Partners:
LOC100691340
Fork-head domain-containing protein.
    
 0.587
I3KE95_ORENI
Forkhead box G1d.
    
 0.587
ENSONIP00000072961
Forkhead box G1a.
    
 0.587
zic5
Zic family member 5 (odd-paired homolog, Drosophila).
    
 
 0.559
I3JR60_ORENI
Slit homolog 2 (Drosophila).
     
 0.557
Irx3
Iroquois homeobox 3a.
   
 0.511
Tbr1
T-box brain transcription factor 1b.
    
 
 0.505
scfd2
Sec1 family domain containing 2; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.480
LOC100700683
ISL LIM homeobox 1.
   
 0.473
LOC100706722
Achaete-scute family bHLH transcription factor 1b.
    
 
 0.460
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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