Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
spata18Spermatogenesis associated 18. (493 aa)    
Predicted Functional Partners:
rsph14
Uncharacterized protein.
   
  
 0.766
Lrrc23
Leucine-rich repeat-containing protein 23 isoform X2.
   
  
 0.735
tex43
Uncharacterized protein.
      
 0.713
LOC100707727
Tetraspanin.
      
 0.702
LOC102077758
Protein shisa-7.
      
 0.700
psmg2
Proteasome assembly chaperone 2; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1. Belongs to the PSMG2 family.
      
 0.695
dlec1
DLEC1 cilia and flagella associated protein.
      
 0.694
spata20
Spermatogenesis associated 20.
      
 0.679
ccdc146
Coiled-coil domain containing 146.
   
  
 0.676
cfap161
Cilia- and flagella-associated protein 161.
   
  
 0.664
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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