STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100712491Neurotrophin receptor associated death domain. (397 aa)    
Predicted Functional Partners:
I3IWI9_ORENI
Nerve growth factor receptor a (TNFR superfamily, member 16).
  
  
 
0.910
LOC100691074
Nerve growth factor receptor b.
  
  
 
0.908
LOC100692989
Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.
     
  0.900
LOC100696124
Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family.
     
  0.900
fgf23
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
     
  0.650
ins
Insulin A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
     
  0.650
I3IX04_ORENI
Ephrin-A2a; Belongs to the ephrin family.
     
  0.650
egf
Epidermal growth factor.
     
  0.650
pdgfc
Platelet derived growth factor c; Belongs to the PDGF/VEGF growth factor family.
     
  0.650
fgf2
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
  0.650
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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