STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcc12ATP-binding cassette, sub-family C (CFTR/MRP), member 12. (1378 aa)    
Predicted Functional Partners:
I3J4R6_ORENI
Uncharacterized protein.
  
  
 
0.901
LOC100700137
ATP-binding cassette, sub-family G (WHITE), member 2a.
   
 0.630
LOC100693338
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.566
abcd4
ATP-binding cassette, sub-family D (ALD), member 4.
   
  
 0.540
abce1
ATP-binding cassette, sub-family E (OABP), member 1.
      
 0.534
LOC100701664
ATP-binding cassette, sub-family G (WHITE), member 2d.
   
 0.513
Abcf3
ATP-binding cassette, sub-family F (GCN20), member 3.
  
 
 0.502
abcg5
ATP-binding cassette, sub-family G (WHITE), member 5.
   
0.499
gopc
Golgi-associated PDZ and coiled-coil motif containing.
   
 0.493
LOC100691786
ATP-binding cassette, sub-family B (MDR/TAP), member 11b.
   
0.487
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: medium (60%) [HD]